Bell Center Publications 2023

*Bell Center authors have been bolded

Ahuja, N., Hwaun, E., Pungor, J. R., Rafiq, R., Nemes, S., Sakmar, T., Vogt, M. A., Grasse, B., Quiroz, J. D., Montague, T. G., Null, R. W., Dallis, D. N., Gavriouchkina, D., Marletaz, F., Abbo, L., Rokhsar, D. S., Niell, C. M., Soltesz, I., Albertin, C. B., & Rosenthal, J. J. C. (2023). Creation of an albino squid line by CRISPR-Cas9 and its application for in vivo functional imaging of neural activity. Current Biology, 0(0). https://doi.org/10.1016/j.cub.2023.05.066

Albertin, C., & Katz, P. (2023). Evolution of cephalopod nervous systems. Current Biology, 33(20), R1087–R1091. https://doi.org/10.1016/j.cub.2023.08.092

Avram-Shperling, A., Kopel, E., Twersky, I., Gabay, O., Ben-David, A., Karako-Lampert, S., Rosenthal, J. J. C., Levanon, E. Y., Eisenberg, E., & Ben-Aroya, S. (2023). Identification of exceptionally potent adenosine deaminases RNA editors from high body temperature organisms. PLoS Genetics, 19(3), e1010661. https://doi.org/10.1371/journal.pgen.1010661

Baden, T., Briseño, J., Coffing, G., Cohen-Bodénès, S., Courtney, A., Dickerson, D., Dölen, G., Fiorito, G., Gestal, C., Gustafson, T., Heath-Heckman, E., Hua, Q., Imperadore, P., Kimbara, R., Król, M., Lajbner, Z., Lichilín, N., Macchi, F., McCoy, M. J., …Rosenthal, J. J. C, & Albertin, C. (2023). Cephalopod-omics: Emerging Fields and Technologies in Cephalopod Biology. Integrative and Comparative Biology, 63(6), 1226–1239. https://doi.org/10.1093/icb/icad087

Birk, M. A., Liscovitch-Brauer, N., Dominguez, M. J., McNeme, S., Yue, Y., Hoff, J. D., Twersky, I., Verhey, K. J., Sutton, R. B., Eisenberg, E., & Rosenthal, J. J. C. (2023). Temperature-dependent RNA editing in octopus extensively recodes the neural proteome. Cell, 186(12), 2544-2555.e13. https://doi.org/10.1016/j.cell.2023.05.004

Brady, E. B., McQuillan, M., Medeiros, A. T., Bubacco, L., Sousa, R., Lafer, E. M., & Morgan, J. R. (2023). Hsc70 rescues the synaptic vesicle trafficking defects caused by α-synuclein dimers. microPublication Biology. https://doi.org/10.17912/micropub.biology.000737

Cai, L., McGuire, N., Hanlon, R., Mooney, T., & Girdhar, Y. (2023). Semi-supervised visual tracking of marine animals using autonomous underwater vehicles. International Journal of Computer Vision., 131(6), 1406–1427. https://doi.org/10.1007/s11263-023-01762-5

Cauret, C., Jordan, D., Kukoly, L., Burton, S., Anele, E., Kwiecien, J., Gansauge, M.-T., Senthillmohan, S., Greenbaum, E., Meyer, M., Horb, M., & Evans, B. (2023). Functional dissection and assembly of a small, newly evolved, W chromosome-specific genomic region of the African clawed frog Xenopus laevis. PLoS Genetics, 19(10), e1010990. https://doi.org/10.1371/journal.pgen.1010990

Diaz Quiroz, J., Ojha, N., Shayhidin, E., De Silva, D., Dabney, J., Lancaster, A., Coull, J., Milstein, S., Fraley, A., Brown, C., & Rosenthal, J. (2023). Development of a selection assay for small guide RNAs that drive efficient site-directed RNA editing. Nucleic Acids Research. https://doi.org/10.1093/nar/gkad098

Diaz Quiroz, J., Siskel, L., & Rosenthal, J. (2023). Site-directed A→I RNA editing as a therapeutic tool: Moving beyond genetic mutations. RNA, rna.079518.122. https://doi.org/10.1261/rna.079518.122

Dimitrakopoulou, D., Khwatenge, C., James-Zorn, C., Paiola, M., Bellin, E., Tian, Y., Sundararaj, N., Polak, E., Grayfer, L., Barnard, D., Ohta, Y., Horb, M., Sang, Y., & Robert, J. (2023). Advances in the Xenopus immunome: Diversification, expansion, and contraction. Developmental & Comparative Immunology, 145, 104734. https://doi.org/10.1016/j.dci.2023.104734

Fisher, G., Roman-Vendrell, C., Brady, E., & Morgan, J. (2023). Ɑ-synuclein alters the morphology of synaptic mitochondria in giant axons of sea lamprey. IBRO Neuroscience Reports, 15, s560. https://doi.org/10.1016/j.ibneur.2023.08.1107

Fujita, R., Augyte, S., Bender, J., Brittingham, P., Buschmann, A., Chalfin, M., Collins, J., Davis, K., Gallagher, J., Gentry, R., Gruby, R., Kleisner, K., Moritsch, M., Price, N., Roberson, L., Taylor, J., & Yarish, C. (2023). Seaweed blue carbon: Ready? Or Not? Marine Policy, 155, 105747. https://doi.org/10.1016/j.marpol.2023.105747

Furlow, J., Saini, S., Mengeling, B., & Horb, M. (2023). SAT013 Characterization of CRISPR/Cas9 induced RXR isotype mutants in Xenopus Laevis. Journal of the Endocrine Society, 7(Supplement_1), bvad114.1751. https://doi.org/10.1210/jendso/bvad114.1751

Imperadore, P., Jones, K. M., Morgan, J. R., De Sio, F., & Stahnisch, F. W. (2023). Editorial: Regeneration from cells to limbs: past, present, and future. Frontiers in Cell and Developmental Biology, 11. https://www.frontiersin.org/articles/10.3389/fcell.2023.1229613

Jones, I., Schumm, M., Stanley, J., Hanlon, R., & Mooney, T. (2023). Longfin squid reproductive behaviours and spawning withstand wind farm pile driving noise. Ices Journal of Marine Science. https://doi.org/10.1093/icesjms/fsad117

Jum’ah, H., Shribak, M., Keikhosravi, A., Li, B., Liu, Y., Obaidat, D., Eliceiri, K. W., Loeffler, A., & Ayub, S. (2023). Detection of crystals in joint fluid aspirates with polychromatic polarisation microscopy. Annals of the Rheumatic Diseases, ard-2023-224331. https://doi.org/10.1136/ard-2023-224331

Kwiatkowski, E. R., Schnytzer, Y., Rosenthal, J. J. C., & Emery, P. (2023). Behavioral circatidal rhythms require Bmal1 in Parhyale hawaiensis. Current Biology : CB, 33(10), 1867-1882.E5. https://doi.org/10.1016/j.cub.2023.03.015

Lewis, T., Phan, S., Castillo, C., Kim, K.-Y., Coppenrath, K., Thomas, W., Hao, Y., Skiba, N., Horb, M., Ellisman, M., & Arshavsky, V. (2023). Photoreceptor disc incisures form as an adaptive mechanism ensuring the completion of disc enclosure. eLife, 12, e89160. https://doi.org/10.7554/elife.89160

Linklater, D., Vailionis, A., Ryu, M., Kamegaki, S., Morikawa, J., Mu, H., Smith, D., Maasoumi, P., Ford, R., Katkus, T., Blamires, S., Kondo, T., Nishijima, Y., Moraru, D., Shribak, M., O’Connor, A., Ivanova, E. P., Ng, S. H., Masuda, H., & Juodkazis, S. (2023). Structure and Optical Anisotropy of Spider Scales and Silk: The Use of Chromaticity and Azimuth Colors to Optically Characterize Complex Biological Structures. Nanomaterials (Basel, Switzerland), 13(12). https://doi.org/10.3390/nano13121894

Maienschein, J. (2023a). Everett Mendelsohn at the MBL. Journal of the History of Biology, 56(4), 629–634. https://doi.org/10.1007/s10739-023-09754-4

Maienschein, J. (2023b). Garland Allen’s Last Book Project. Journal of the History of Biology, 56(2), 239–250. https://doi.org/10.1007/s10739-023-09726-8

Maienschein, J. (2023c). Garland E. Allen III (1936–2023). Science, 379(6639), 1304–1304. https://doi.org/10.1126/science.adh5118

Maienschein, J. (2023d). The camouflaged metaphysics of embryos. Issues in Science and Technology. https://doi.org/10.58875/cnst5707

Martens, K., Shribak, M., Arkhipova, I., & Schön, I. (2023). The common morphospecies Cypridopsis vidua (O.F. MÜLLER, 1776) (Crustacea, Ostracoda) is not an obligate parthenogen. Belgian Journal of Zoology, 153. https://doi.org/10.26496/bjz.2023.107

Maxson Jones, K., & Morgan, J. R. (2023). Lampreys and spinal cord regeneration: “A very special claim on the interest of zoologists,” 1830s-present. Frontiers in Cell and Developmental Biology, 11. https://doi.org/10.3389/fcell.2023.1113961

Moniz, H., Kruleski, S., Risbud, A., Louden, S., Hanlon, R., Stokes, A., Palmer, S., & Feldman, C. (2023). Aposematic coloration of Pacific newts (Taricha) provides a qualitatively but not quantitatively honest signal to predators. Biological Journal of the Linnean Society, 139(1), 1–17. https://doi.org/10.1093/biolinnean/blad007

Morselli, M., Bennett, R., Shaidani, N.-I., Horb, M., Peshkin, L., & Pellegrini, M. (2023). Age-associated DNA methylation changes in Xenopus frogs. Epigenetics, 18(1). https://doi.org/10.1080/15592294.2023.2201517

Perillo, M., Swartz, S. Z., Pieplow, C., & Wessel, G. M. (2023). Molecular mechanisms of tubulogenesis revealed in the sea star hydro-vascular organ. Nature Communications, 14(1), 2402. https://doi.org/10.1038/s41467-023-37947-2

Ramirez, C., Khoo, M., G, M., Ferguson, S., Walker, S., & Echeverri, K. (2023). Comparison of Blastema Formation after Injury in Two Cephalopod Species. microPublication Biology, 2023, 10.17912/micropub.biology.000946. https://doi.org/10.17912/micropub.biology.000946

Rosenthal, J. J. C., & Eisenberg, E. (2023). Extensive Recoding of the Neural Proteome in Cephalopods by RNA Editing. Annual Review of Animal Biosciences, 11(1), 57–75. https://doi.org/10.1146/annurev-animal-060322-114534

Saffer, A., Baskin, T., Verma, A., Stanislas, T., Oldenbourg, R., & Irish, V. (2023). Cellulose assembles into helical bundles of uniform handedness in cell walls with abnormal pectin composition. The Plant Journal, 116(3), 855–870. https://doi.org/10.1111/tpj.16414

Spurrell, M., Oulhen, N., Foster, S., Perillo, M., & Wessel, G. (2023). Gene regulatory divergence amongst echinoderms underlies appearance of pigment cells in sea urchin development. Developmental Biology, 494, 13–25. https://doi.org/10.1016/j.ydbio.2022.11.008

Sterner, Z., Jabrah, A., Shaidani, N.-I., Horb, M., Dockery, R., Paul, B., & Buchholz, D. (2023). Development and metamorphosis in frogs deficient in the thyroid hormone transporter MCT8. General and Comparative Endocrinology, 331, 114179. https://doi.org/10.1016/j.ygcen.2022.114179

Subramanian, E., Elewa, A., Brito, G., Kumar, A., Segerstolpe, A., Karampelias, C., Bjorklund, A., Sandberg, R., Echeverri, K., Lui, W.-O., Andersson, O., & Simon, A. (2023). A small noncoding RNA links ribosome recovery and translation control to dedifferentiation during salamander limb regeneration. Developmental Cell, 58(6), 450-+. https://doi.org/10.1016/j.devcel.2023.02.007

Vallecillo-Viejo, I. C., Voss, G., Albertin, C. B., Liscovitch-Brauer, N., Eisenberg, E., & Rosenthal, J. J. C. (2023). Squid express conserved ADAR orthologs that possess novel features. Frontiers in Genome Editing, 5. https://doi.org/10.3389/fgeed.2023.1181713

Vicente-Rodríguez, L. C., Torres-Arroyo, A. C., Hernández-Vázquez, A., Rosa-Casillas, M., Bracho-Rincón, D. P., de Jesús, P. M., Behra, M. L., Habib, M. R., Zhou, X.-N., Rosenthal, J. J. C., & Miller, M. W. (2023). The FMRF-NH2 gated sodium channel of Biomphalaria glabrata: Localization and expression following infection by Schistosoma mansoni. PLoS Neglected Tropical Diseases, 17(6), e0011249. https://doi.org/10.1371/journal.pntd.0011249

Voss, G., & Rosenthal, J. J. C. (2023). High-level RNA editing diversifies the coleoid cephalopod brain proteome. Briefings in Functional Genomics, elad034. https://doi.org/10.1093/bfgp/elad034

Walker, S., Santos-Ferreira, T., & Echeverri, K. (2023). A Reproducible Spinal Cord Crush Injury in the Regeneration-Permissive Axolotl. Methods in Molecular Biology, 2636, 237–246. https://doi.org/10.1007/978-1-0716-3012-9_13