Ecosystems Publications

Recent Publications

Peredo E. L., Thomas S., Cardon Z. G. (2025). Establishment and micropropagation of axenic in vitro cultures of salt marsh grasses within the genus <i>Sporobolus</i>. Applications In Plant Sciences. doi: 10.1002/aps3.70033

Vallino J. J., Ahern O., Huber J. A. (2025). Deriving microbial food web structure by maximizing entropy production over variable timescales. Interface Focus. 15. doi: 10.1098/rsfs.2025.0023

Spera A. C., McClelland J. W., Demir C., Cardenas M. B., Guimond J. A. (2025). Saltwater inundation's concurrent effects on below-ground thermal hydrology and above-ground properties of Arctic coastal tundra. The Science Of The Total Environment. 1008:180906. doi: 10.1016/j.scitotenv.2025.180906

Vidal E., Lindsay M. R., Bradley J. A., Osburn M. R., Ruff S. E. (2025). Subsurface Life on Earth as a Key to Unlock Extraterrestrial Mysteries. Microbial Biotechnology. 18:e70286. doi: 10.1111/1751-7915.70286

Sullivan H. L., Besterman A. F., Jakuba R. W., Costa J. E., Mezan D., Deegan L. A., Bowen J. L. (2025). Salt marsh decomposition after hydrologic restoration with runnels. Estuarine Coastal And Shelf Science. 327:109559. doi: 10.1016/j.ecss.2025.109559

Lloret J. (2025). High variability in carbon stable isotopes in the macroalga Ulva spp. and implications for eutrophication indicators. Scientific Reports. 15:40889. doi: 10.1038/s41598-025-24788-w

DiSalvo B., Paul B. G., Cardon Z. G. (2025). Complete genome sequence of Thioclava strain BDS19, isolated from coastal marsh sediment.. Microbiology Resource Announcements. doi: 10.1128/mra.00855-25

Pedrosa-Pamies R., Conte M. H., Honda M., Herndl G. J. (2025). Editorial: The oceanic particle flux and its cycling within the deep water column, volume II. Frontiers In Earth Science. 13:1716510. doi: 10.3389/feart.2025.1716510

Hayn M., Marino R., Ganju N. K., Howarth R. W., Foreman K. H. (2025). Using Multiple Lines of Evidence to Evaluate Spatio-Temporal Trends in Nitrogen Loading to a Eutrophic Estuary. Estuaries And Coasts. 49. doi: 10.1007/s12237-025-01630-0

Sures K., Esser S. P., Bornemann T. L. V., Moore C. J., Soares A. R., Plewka J., Figueroa-Gonzalez P. A., Ruff S. E., Moraru C., Probst A. J. (2025). Acquisition of Spacers from Foreign Prokaryotic Genomes by CRISPR-Cas Systems in Natural Environments. Genome Biology And Evolution. 17. doi: 10.1093/gbe/evaf201

Elkassas S. M., Fortunato C. S., Grim S. L., Butterfield D. A., Holden J. F., Vallino J. J., Algar C. K., Zeigler Allen L., Larson B. T., Proskurowski G., Reddington E., Stewart L. C., Topcuoglu B., Huber J. A. (2025). Metabolic and population profiles of active subseafloor autotrophs in young oceanic crust at deep-sea hydrothermal vents. Applied And Environmental Microbiology. 91. doi: 10.1128/aem.01868-25

Weiss M., Holland A. R., D'Amato A. W., Deegan L. A., Farmer W. H., Hoving C., Karmalkar A. V., Latzka A., Magee M., McIntyre P. B., Morelli T. L., Notaro M., Olmstead N., Palmer R. N., Pau N., Renfrew R., Ribic C. A., Sheppard J., Staudinger M. D., Zuckerberg B., Bradley B. A. (2025). Relationship-centered engagement bridges the divide between science and management, and enhances climate adaptation. Bioscience. 75:842-855. doi: 10.1093/biosci/biaf087

Macdonald A. A., Dowling Q. S., Cardon Z. G. (2025). Beech leaf disease reduces nitrogen retranslocation at leaf fall, altering litter chemistry. Oecologia. 207. doi: 10.1007/s00442-025-05790-5

Wiegman A. R. H., Kennedy C. D., Neill C., Jakuba R. W., Welsh M. K., Millar D., Buda A. (2025). Modeling Attenuation of Nitrogen Loads Delivered to Coastal Bays From Ecological Restoration of Cultivated Wetlands. Journal Of Geophysical Research Biogeosciences. 130. doi: 10.1029/2025jg008742

Atwood A., Coe M. T., Neill C., Maracahipes-Santos L., Brando P., Riskin S. H., Castanho A., Deegan L., Silveiro A. C., Macedo M. N. (2025). Deep Soil Water Reservoirs Modulate Land Use and Drought Effects on the Water Budget of Amazon Headwaters. Water Resources Research. 61. doi: 10.1029/2024WR039729

Reed D. E., Chu H., Peter B. G., Chen J., Abraha M., Amiro B., Anderson R. G., Arain M. A., Arruda P., Barron-Gafford G. A., Bernacchi C., Beverly D. P., Biraud S. C., Black T. A., Blanken P. D., Bohrer G., Bowler R., Bowling D. R., Bret-Harte M. S., Bretfeld M., Brunsell N. A., Bullock S. H., Celis G., Chen X., Classen A. T., Cook D. R., Cueva A., Dalmagro H. J., Davis K., Desai A., Duff A. J., Dunn A. L., Durden D., Edgar C. W., Euskirchen E., Bracho R., Ewers B., Flanagan L. B., Florian C., Foord V., Forbrich I., Forsythe B. R., Frank J., Garatuza-Payan J., Goslee S., Gough C., Green M., Griffis T., Helbig M., Hill A. C., Hinkle R., Horne J., Humphreys E., Ikawa H., Iwahana G., Jassal R., Johnson B., Johnson M., Kannenberg S. A., Kelsey E., King J., Knowles J. F., Knox S., Kobayashi H., Kolb T., Kolka R., Krauss K. W., Kutzbach L., Lamb B., Law B., Lee S.-C., Lee X., Liu H., Loescher H. W., Malone S. L., Matamala R., Mauritz M., Metzger S., Meyer G., Mitra B., Munger J. W., Nesic Z., Noormets A., O'Halloran T. L., O'Keeffe P. T., Oberbauer S. F., Oechel W., Oikawa P., Olivas P. C., Ouimette A., Pastorello G., Perez-Quezada J. F., Phillips C., Posse G., Qu B., Quinton W. L., Reba M. L., Richardson A. D., Picasso V., Rocha A. V., Rodriguez J. C., Ruzol R., Saleska S., Scott R. L., Schreiner-McGraw A. P., Schuur E. A. G., Silveira M., Sonnentag O., Spittlehouse D. L., Staebler R., Starr G., Staudhammer C., Still C., Sturtevant C., Sullivan R. C., Suyker A., Trejo D., Ueyama M., Vargas R., Viner B., Vivoni E. R., Wang D., Ward E. J., Wiesner S., Windham-Myers L., Yannick D., Yepez E. A., Zenone T., Zhao J., Zona D. (2025). Network of networks: Time series clustering of AmeriFlux sites. Agricultural And Forest Meteorology. 372:110686. doi: 10.1016/j.agrformet.2025.110686

McClelland J. W., Shiklomanov A. I., Suslova A., Tretiakov M., Spence R. G. M., Tank S. E., Zolkos S. (2025). Arctic river discharge. Bulletin Of The American Meteorological Society. 106.

Thoman R. L., Moon T. A., Druckenmiller M. L., Askjaer T. G., Ballinger T. J., Bhatt U. S., Berner L. T., Bernhard G. H., Bigalke S., Bjerke J. W., Bliss A., Box J. E., Brady M., Brettschneider B., Butler A. H., Christiansen H. H., Crawford A., Decharme B., Derksen C., Divine D., Elias Chereque A., Epstein H. E., Farrell S., Fausto R. S., Fettweis X., Fioletov V. E., Forbes B. C., Frost G. V. J., Gerland S., Grooß J.-U., Hanna E., Hendricks S., Howell S., Ialongo I., Isaksen K., Jia G., Johnsen B., Kaleschke L., Kim S.-J., Labe Z. M., Lader R., Lakkala K., Lara M. J., Lee S. H., Loomis B. D., Luojus K., Macander M. J., Magnússon R. Í., Mankoff K. D., McClelland J. W., Medley B., Meier W. N., Montesano P. M., Mote T. L., Motrøen Gjelten H., Mudryk L., Müller R., Neigh C. S. R., Nyland K. E., Overland J. E., Perovich D. K., Petty A., Phoenix G. K., Poinar K., Ricker R., Romanovsky V. E., Scheller J. H., Serreze M. C., Shiklomanov A. I., Shiklomanov N. I., Smith B. E., Smith S. L., Spencer R. G. M., Streletskiy D. A., Suslova A., Svendby T., Tank S. E., Tian-Kunze X., Tedesco M., Timmermans M.-L., Tømmervik H., Tretiakov M., Waigl C. F., Walker D. S. A., Walsh J. E., Wang M., Webster M., Yang D., Zolkos S. (2025). The Arctic. Bulletin Of The American Meteorological Society. 106:s300-s356. doi: 10.1175/bams-d-25-0104.1

Howarth R. W., Chen D. (2025). A Reason to Celebrate. Ocean-Land-Atmosphere Research. 4. doi: 10.34133/olar.0117

Vineis J. H., Bulseco A. N., Cardon Z. G., Bowen J. L. Microbial consortia in salt marsh sediments are sequentially buried over millennia and genomic complementarity analysis indicates an important role in complex carbon decomposition. doi: 10.1101/2025.07.18.665577